| SNP | Name | Pav_sc0000716.1_346174K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 5305423 | |
| PAV_r1.0 | Name | Pav_sc0000716.1 |
| Position | 346174 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000716.1_g520.1.mk |
| Annotation | PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.20C>A | |
| Amino Acid | p.Ser7Tyr | |
| PCR | Forward primer | CACACAGCCTAACCAAAGCA |
| Reverse primer | ATCCTCAATTCCCCAAGACC | |
| Product size | 261 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | -/- |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |