| SNP | Name | Pav_sc0007189.1_4365Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 16548321 | |
| PAV_r1.0 | Name | Pav_sc0007189.1 |
| Position | 4365 | |
| SSR | motif | |
| Gene | Name | Pav_sc0007189.1_g020.1.mk |
| Annotation | hypothetical protein CISIN_1g042166mg | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.159A>G | |
| Amino Acid | p.Pro53Pro | |
| PCR | Forward primer | TGTGGAGCAGTCAGGTTCTG |
| Reverse primer | GAGATGATGAACACCCGGAG | |
| Product size | 239 | |
| Enzymes for CAPS | MspI | |
| Exp. fragment size (REF) | 187,35,17 | |
| Exp. fragment size (ALT) | 96,91,35,17 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |