SNP Information
    
      
      
        
            
              | SNP | Name | Pav_sc0005527.1_35776W | 
	
            
              | REF | T | 
	
            
              | ALT | A | 
	
            
	      | Chromosome | Name | PAV_r1.0chr3 | 
	
            
	      | Position | 9251287 | 
	
            
	      | PAV_r1.0 | Name | Pav_sc0005527.1 | 
	
            
	      | Position | 35776 | 
	
            
	      | SSR | motif |  | 
	
            
	      | Gene | Name |  | 
	
            
	      | Annotation |  | 
	
            
	      | snpEff | Effect | intergenic_region | 
	
            
	      | Impact | MODIFIER | 
	
            
	      | Codon | n.35776T>A | 
	
            
	      | Amino Acid |  | 
	
            
	      | PCR | Forward primer | GTGGGTCAAGGGTTTCATTT | 
	
            
	      | Reverse primer | TCCCAAATCATGACCACAAA | 
	
            
	      | Product size | 342 | 
	
            
	      | Enzymes for CAPS |  | 
	
            
	      | Exp. fragment size (REF) |  | 
            
	      | Exp. fragment size (ALT) |  | 
	
            
	      | References |  | 
	        
        
        Germplasm List
       
         
    
      | Benikirari | REF/ALT | 
    
      | Benisayaka | REF/REF | 
    
      | Benishuho | REF/REF | 
    
      | Benitemari | REF/REF | 
    
      | Beniyutaka | REF/REF | 
    
      | Nanyo | REF/REF | 
    
      | Satonishiki | REF/REF |