| SNP | Name | Pav_sc0004923.1_8237K |
|---|---|---|
| REF | T | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr8 |
| Position | 7646266 | |
| PAV_r1.0 | Name | Pav_sc0004923.1 |
| Position | 8237 | |
| SSR | motif | |
| Gene | Name | Pav_sc0004923.1_g010.1.br |
| Annotation | PREDICTED: putative disease resistance protein RGA1 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1376A>C | |
| Amino Acid | p.Tyr459Ser | |
| PCR | Forward primer | GCCATCCGGAAGAGACACTA |
| Reverse primer | ACGCTCTCTCTGCATGGAAT | |
| Product size | 345 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 119,163,21,42 | |
| Exp. fragment size (ALT) | 282,21,42 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |