| SNP | Name | Pav_sc0004527.1_39562R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 17755056 | |
| PAV_r1.0 | Name | Pav_sc0004527.1 |
| Position | 39562 | |
| SSR | motif | |
| Gene | Name | Pav_sc0004527.1_g060.1.mk |
| Annotation | PREDICTED: uncharacterized protein At2g33490 isoform X1 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.685-39A>G | |
| Amino Acid | ||
| PCR | Forward primer | ACACCTGTGCACTTCAGCAC |
| Reverse primer | ACTTCCGTGAGAATGATGGC | |
| Product size | 317 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 317 | |
| Exp. fragment size (ALT) | 149,168 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | ALT/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |