SNP Information
SNP |
Name |
Pav_sc0004348.1_6170M |
REF |
A |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr2 |
Position |
5575220 |
PAV_r1.0 |
Name |
Pav_sc0004348.1 |
Position |
6170 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.6170A>C |
Amino Acid |
|
PCR |
Forward primer |
CCAGTCCACTGTCCATTGTG |
Reverse primer |
GGTCGGAGAATGAACGACAT |
Product size |
273 |
Enzymes for CAPS |
|
Exp. fragment size (REF) |
|
Exp. fragment size (ALT) |
|
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
REF/REF |
Nanyo |
REF/REF |
Satonishiki |
REF/ALT |