SNP Information
SNP |
Name |
Pav_sc0003492.1_202069M |
REF |
C |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr4 |
Position |
13064392 |
PAV_r1.0 |
Name |
Pav_sc0003492.1 |
Position |
202069 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.202069C>A |
Amino Acid |
|
PCR |
Forward primer |
CCAAGTTCAAATCCCCCTCT |
Reverse primer |
ACAAGGCAGACTTGGGTCAC |
Product size |
311 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
311 |
Exp. fragment size (ALT) |
234,77 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/ALT |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/ALT |
Nanyo |
REF/REF |
Satonishiki |
REF/ALT |