| SNP | Name | Pav_sc0003155.1_25658Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr8 |
| Position | 7679523 | |
| PAV_r1.0 | Name | Pav_sc0003155.1 |
| Position | 25658 | |
| SSR | motif | |
| Gene | Name | Pav_sc0003155.1_g060.1.br |
| Annotation | PREDICTED: putative disease resistance protein RGA1 isoform X2 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1079-29A>G | |
| Amino Acid | ||
| PCR | Forward primer | ATGTCTTCTGGTCGCTTGCT |
| Reverse primer | AGAGGAGCAGCAGTGGTTGT | |
| Product size | 240 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |