| SNP | Name | Pav_sc0003135.1_224661Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 5124715 | |
| PAV_r1.0 | Name | Pav_sc0003135.1 |
| Position | 224661 | |
| SSR | motif | |
| Gene | Name | Pav_sc0003135.1_g440.1.mk |
| Annotation | PREDICTED: piriformospora indica-insensitive protein 2-like | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.1962T>C | |
| Amino Acid | p.Ile654Ile | |
| PCR | Forward primer | TGGCTTCAGACAATCACCAA |
| Reverse primer | CAAATGTACCTCTTCCAAAGCC | |
| Product size | 279 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |