| SNP | Name | Pav_sc0003098.1_89120R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 8240122 | |
| PAV_r1.0 | Name | Pav_sc0003098.1 |
| Position | 89120 | |
| SSR | motif | |
| Gene | Name | Pav_sc0003098.1_g210.1.br |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: phylloplanin-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.5C>T | |
| Amino Acid | p.Thr2Ile | |
| PCR | Forward primer | GACCTGGGATCCTCATCAAT |
| Reverse primer | GCACAACAATTCTGCAAGTCA | |
| Product size | 349 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 7,194,148 | |
| Exp. fragment size (ALT) | 7,85,109,148 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |