| SNP | Name | Pav_sc0002893.1_118379W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 20075612 | |
| PAV_r1.0 | Name | Pav_sc0002893.1 |
| Position | 118379 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002893.1_g310.1.mk |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: alpha-glucan water dikinase, chloroplastic | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.2134-44T>A | |
| Amino Acid | ||
| PCR | Forward primer | GGATTCCCCGATCATAGCTT |
| Reverse primer | ATGGAGGAATGGCATCAAAA | |
| Product size | 261 | |
| Enzymes for CAPS | DraI | |
| Exp. fragment size (REF) | 146,6,109 | |
| Exp. fragment size (ALT) | 146,7,108 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/REF |