SNP Information
SNP |
Name |
Pav_sc0002772.1_127509W |
REF |
A |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
5100379 |
PAV_r1.0 |
Name |
Pav_sc0002772.1 |
Position |
127509 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.127509A>T |
Amino Acid |
|
PCR |
Forward primer |
ATGGGGCCACACTACTTGAC |
Reverse primer |
TATATTTGGGAATGCAGGGC |
Product size |
232 |
Enzymes for CAPS |
DraI |
Exp. fragment size (REF) |
106,126 |
Exp. fragment size (ALT) |
232 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/REF |