| SNP | Name | Pav_sc0002567.1_75552R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 12583893 | |
| PAV_r1.0 | Name | Pav_sc0002567.1 |
| Position | 75552 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002567.1_g130.1.br |
| Annotation | PREDICTED: beta-amylase 1, chloroplastic-like | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.136T>C | |
| Amino Acid | p.Leu46Leu | |
| PCR | Forward primer | GGTCGAAAGAAGAGCAGCAC |
| Reverse primer | ATAGGTGCCGGTGTGAAGTC | |
| Product size | 277 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |