| SNP | Name | Pav_sc0002360.1_167910W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 17375977 | |
| PAV_r1.0 | Name | Pav_sc0002360.1 |
| Position | 167910 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002360.1_g300.1.mk |
| Annotation | PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.434+10A>T | |
| Amino Acid | ||
| PCR | Forward primer | ACACACCATAGCGCACAGAC |
| Reverse primer | ATGAATTCCAGGATCCTCCC | |
| Product size | 288 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |