SNP Information
SNP |
Name |
Pav_sc0002327.1_406063S |
REF |
G |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
42620539 |
PAV_r1.0 |
Name |
Pav_sc0002327.1 |
Position |
406063 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.406063G>C |
Amino Acid |
|
PCR |
Forward primer |
TGGATGGAAAATTGGATGATG |
Reverse primer |
ATGCCAAAACTTCCAAGCTC |
Product size |
348 |
Enzymes for CAPS |
|
Exp. fragment size (REF) |
|
Exp. fragment size (ALT) |
|
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
-/- |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |