| SNP | Name | Pav_sc0002233.1_140542Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 397015 | |
| PAV_r1.0 | Name | Pav_sc0002233.1 |
| Position | 140542 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002233.1_g280.1.mk |
| Annotation | PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.713C>T | |
| Amino Acid | p.Ser238Leu | |
| PCR | Forward primer | TTTGTGTCTGGCTTGCTGTC |
| Reverse primer | AACAAACCGTCAGCAGGAAC | |
| Product size | 302 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |