| SNP | Name | Pav_sc0002208.1_248448R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 28553827 | |
| PAV_r1.0 | Name | Pav_sc0002208.1 |
| Position | 248448 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002208.1_g520.1.mk |
| Annotation | BZIP domain class transcription factor | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.405T>C | |
| Amino Acid | p.Ala135Ala | |
| PCR | Forward primer | AAGGAACACCCCAATCACAG |
| Reverse primer | AGCTCAGCCAAAGACTGGAG | |
| Product size | 271 | |
| Enzymes for CAPS | HaeIII | |
| Exp. fragment size (REF) | 85,186 | |
| Exp. fragment size (ALT) | 85,72,114 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | ALT/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |