| SNP | Name | Pav_sc0002197.1_5624Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 17288608 | |
| PAV_r1.0 | Name | Pav_sc0002197.1 |
| Position | 5624 | |
| SSR | motif | |
| Gene | Name | Pav_sc0002197.1_g010.1.mk |
| Annotation | PREDICTED: probable pectate lyase 4 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.759+135A>G | |
| Amino Acid | ||
| PCR | Forward primer | TCCTCTAGCGTTTCTCCCAA |
| Reverse primer | ATGAAGCGGGACAGAAGAAA | |
| Product size | 262 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |