| SNP | Name | Pav_sc0001954.1_72500K |
|---|---|---|
| REF | T | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 3647739 | |
| PAV_r1.0 | Name | Pav_sc0001954.1 |
| Position | 72500 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001954.1_g150.1.mk |
| Annotation | PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1961A>C | |
| Amino Acid | p.Gln654Pro | |
| PCR | Forward primer | GCAACCAAAGGAACCAAAGA |
| Reverse primer | AAGCAAGAACTTCGAAGGCA | |
| Product size | 272 | |
| Enzymes for CAPS | MspI | |
| Exp. fragment size (REF) | 272 | |
| Exp. fragment size (ALT) | 194,78 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |