SNP Information
SNP |
Name |
Pav_sc0001944.1_58496R |
REF |
A |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
11384726 |
PAV_r1.0 |
Name |
Pav_sc0001944.1 |
Position |
58496 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.58496A>G |
Amino Acid |
|
PCR |
Forward primer |
TGGCTTCGATAATGGCTAAGA |
Reverse primer |
AACCCTACTGGCTGGCTTTT |
Product size |
311 |
Enzymes for CAPS |
HaeIII |
Exp. fragment size (REF) |
311 |
Exp. fragment size (ALT) |
87,224 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/REF |