SNP Information
SNP |
Name |
Pav_sc0001878.1_81243R |
REF |
G |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
9964867 |
PAV_r1.0 |
Name |
Pav_sc0001878.1 |
Position |
81243 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.81243G>A |
Amino Acid |
|
PCR |
Forward primer |
GAATGGAGTTGGTCCTCCAG |
Reverse primer |
CACTATGCTGAGGTGGCTGA |
Product size |
224 |
Enzymes for CAPS |
HhaI |
Exp. fragment size (REF) |
98,126 |
Exp. fragment size (ALT) |
224 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
ALT/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
REF/REF |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |