| SNP | Name | Pav_sc0001836.1_11414Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 4109478 | |
| PAV_r1.0 | Name | Pav_sc0001836.1 |
| Position | 11414 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001836.1_g030.1.mk |
| Annotation | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.889-445G>A | |
| Amino Acid | ||
| PCR | Forward primer | GTACACCACGACCCCTGAAT |
| Reverse primer | TTTAGGTTTGGGGAATGGGT | |
| Product size | 275 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |