SNP Information
SNP |
Name |
Pav_sc0001718.1_192486M |
REF |
C |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr7 |
Position |
6704480 |
PAV_r1.0 |
Name |
Pav_sc0001718.1 |
Position |
192486 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.192486C>A |
Amino Acid |
|
PCR |
Forward primer |
TGAGCTGTACAAACCTGCCA |
Reverse primer |
GTTGGTAGTGTGTTTGGGGC |
Product size |
287 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
8,150,129 |
Exp. fragment size (ALT) |
8,279 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |