SNP Information
SNP |
Name |
Pav_sc0001715.1_39335Y |
REF |
T |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
32450600 |
PAV_r1.0 |
Name |
Pav_sc0001715.1 |
Position |
39335 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.39335T>C |
Amino Acid |
|
PCR |
Forward primer |
TTGATCAATGGGTCAAAGTCTG |
Reverse primer |
CGTGTGGGGTCTAGGAAAGA |
Product size |
248 |
Enzymes for CAPS |
|
Exp. fragment size (REF) |
|
Exp. fragment size (ALT) |
|
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
ALT/ALT |
Benitemari |
ALT/ALT |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |