| SNP | Name | Pav_sc0001699.1_7828W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 20784068 | |
| PAV_r1.0 | Name | Pav_sc0001699.1 |
| Position | 7828 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001699.1_g050.1.br |
| Annotation | ||
| snpEff | Effect | initiator_codon_variant |
| Impact | LOW | |
| Codon | c.1A>T | |
| Amino Acid | p.Met1? | |
| PCR | Forward primer | GGTGCTTGATATGCTCGGTT |
| Reverse primer | AATTGTTGCAGGTGACTCCC | |
| Product size | 330 | |
| Enzymes for CAPS | BglII | |
| Exp. fragment size (REF) | 330 | |
| Exp. fragment size (ALT) | 120,210 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |