| SNP | Name | Pav_sc0001699.1_185987W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 20605909 | |
| PAV_r1.0 | Name | Pav_sc0001699.1 |
| Position | 185987 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001699.1_g620.1.mk |
| Annotation | PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1052-54A>T | |
| Amino Acid | ||
| PCR | Forward primer | TGGAGCGTCAAAATTCCTTC |
| Reverse primer | TGCAATTCTGGATTTGGTCA | |
| Product size | 312 | |
| Enzymes for CAPS | DraI | |
| Exp. fragment size (REF) | 73,239 | |
| Exp. fragment size (ALT) | 312 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |