| SNP | Name | Pav_sc0001623.1_5690S |
|---|---|---|
| REF | G | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 34516791 | |
| PAV_r1.0 | Name | Pav_sc0001623.1 |
| Position | 5690 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001623.1_g030.1.mk |
| Annotation | PREDICTED: zeaxanthin epoxidase, chloroplastic | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.707C>G | |
| Amino Acid | p.Ser236Cys | |
| PCR | Forward primer | TTCCCAAGTTCAGGGTATGC |
| Reverse primer | AGATCATCGAAATCGTTGGC | |
| Product size | 263 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |