| SNP | Name | Pav_sc0001583.1_73868R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 9922460 | |
| PAV_r1.0 | Name | Pav_sc0001583.1 |
| Position | 73868 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001583.1_g120.1.mk |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.2334A>G | |
| Amino Acid | p.Lys778Lys | |
| PCR | Forward primer | TTGATGCCCCATGTATTTCA |
| Reverse primer | GCTGCCTCCTGGAGAGTCTA | |
| Product size | 223 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |