SNP Information
SNP |
Name |
Pav_sc0001582.1_74741R |
REF |
G |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr2 |
Position |
21856040 |
PAV_r1.0 |
Name |
Pav_sc0001582.1 |
Position |
74741 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.74741G>A |
Amino Acid |
|
PCR |
Forward primer |
GCAAATGTCGTTGTCAATGC |
Reverse primer |
TATTCTAGGGCCTGCTCCAA |
Product size |
327 |
Enzymes for CAPS |
HaeIII |
Exp. fragment size (REF) |
159,158,10 |
Exp. fragment size (ALT) |
317,10 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
-/- |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |