SNP Information
SNP |
Name |
Pav_sc0001545.1_56188S |
REF |
G |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr4 |
Position |
1559611 |
PAV_r1.0 |
Name |
Pav_sc0001545.1 |
Position |
56188 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.56188G>C |
Amino Acid |
|
PCR |
Forward primer |
CTACCAGCTACCACCTTCGG |
Reverse primer |
TGTGGCAATGTTAGTCCGTT |
Product size |
348 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
156,192 |
Exp. fragment size (ALT) |
348 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |