| SNP | Name | Pav_sc0001545.1_25498Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 1590301 | |
| PAV_r1.0 | Name | Pav_sc0001545.1 |
| Position | 25498 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001545.1_g050.1.mk |
| Annotation | hypothetical protein PRUPE_ppa002910mg | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1293-27G>A | |
| Amino Acid | ||
| PCR | Forward primer | CAAGGTAGTGTTGGGGGAAA |
| Reverse primer | AGCATGGGAGAGCACAATTC | |
| Product size | 324 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |