SNP Information
SNP |
Name |
Pav_sc0001422.1_90285M |
REF |
A |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
12236677 |
PAV_r1.0 |
Name |
Pav_sc0001422.1 |
Position |
90285 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.90285A>C |
Amino Acid |
|
PCR |
Forward primer |
GAATTCAGCCTCAAACCTGC |
Reverse primer |
GGCTTACGATCCAGTGGTGT |
Product size |
277 |
Enzymes for CAPS |
HaeIII |
Exp. fragment size (REF) |
277 |
Exp. fragment size (ALT) |
72,205 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
ALT/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |