| SNP | Name | Pav_sc0001405.1_424568Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 23317905 | |
| PAV_r1.0 | Name | Pav_sc0001405.1 |
| Position | 424568 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001405.1_g870.1.mk |
| Annotation | PREDICTED: DNA mismatch repair protein MSH3 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.879A>G | |
| Amino Acid | p.Thr293Thr | |
| PCR | Forward primer | TCAAAACATCAGGTGGGTGA |
| Reverse primer | TTGGCAAAGGAAAAATTGGA | |
| Product size | 291 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |