SNP Information
SNP |
Name |
Pav_sc0001405.1_338570R |
REF |
A |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr2 |
Position |
23231907 |
PAV_r1.0 |
Name |
Pav_sc0001405.1 |
Position |
338570 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.338570A>G |
Amino Acid |
|
PCR |
Forward primer |
GAGAGGCAGAGCACAAGAGC |
Reverse primer |
GCAGCCTGTGGATGAAGC |
Product size |
348 |
Enzymes for CAPS |
HaeIII |
Exp. fragment size (REF) |
348 |
Exp. fragment size (ALT) |
235,113 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/ALT |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |