| SNP | Name | Pav_sc0001369.1_197740M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 6370286 | |
| PAV_r1.0 | Name | Pav_sc0001369.1 |
| Position | 197740 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001369.1_g450.1.mk |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g15930 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.2189+693G>T | |
| Amino Acid | ||
| PCR | Forward primer | CCTTTGCCATGCAAATAGGT |
| Reverse primer | AGGATTTAATACAGTGGCATGTG | |
| Product size | 346 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 156,190 | |
| Exp. fragment size (ALT) | 346 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | -/- |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |