| SNP | Name | Pav_sc0001364.1_47602M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 28052531 | |
| PAV_r1.0 | Name | Pav_sc0001364.1 |
| Position | 47602 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001364.1_g130.1.mk |
| Annotation | hypothetical protein L484_008465 | |
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-1710C>A | |
| Amino Acid | ||
| PCR | Forward primer | CAGGTCTAGTGAGGGCCTTG |
| Reverse primer | GAAGCAATTTTGAGGGCAAC | |
| Product size | 274 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 274 | |
| Exp. fragment size (ALT) | 200,74 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |