| SNP | Name | Pav_sc0001342.1_139909Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 7238037 | |
| PAV_r1.0 | Name | Pav_sc0001342.1 |
| Position | 139909 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001342.1_g170.1.mk |
| Annotation | PREDICTED: APO protein 1, chloroplastic | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.129+33T>C | |
| Amino Acid | ||
| PCR | Forward primer | CCTCCAACAGTCTCCTCTGC |
| Reverse primer | GCAACTGCTGTGAAAATGGA | |
| Product size | 345 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |