| SNP | Name | Pav_sc0001339.1_45589W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 17102207 | |
| PAV_r1.0 | Name | Pav_sc0001339.1 |
| Position | 45589 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001339.1_g090.1.mk |
| Annotation | PREDICTED: WRKY transcription factor 44 isoform X2 | |
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-540T>A | |
| Amino Acid | ||
| PCR | Forward primer | ACCCAAACTTGCATTTCTGC |
| Reverse primer | ATGGGCTTGTCTCCTTTTGA | |
| Product size | 324 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |