| SNP | Name | Pav_sc0001335.1_63023W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 24256901 | |
| PAV_r1.0 | Name | Pav_sc0001335.1 |
| Position | 63023 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001335.1_g150.1.mk |
| Annotation | PREDICTED: probable plastid-lipid-associated protein 14, chloroplastic | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.911+32T>A | |
| Amino Acid | ||
| PCR | Forward primer | AGCACCATTTTTGCCATCAT |
| Reverse primer | ACTTGGATTTATGCCAACCG | |
| Product size | 320 | |
| Enzymes for CAPS | DraI | |
| Exp. fragment size (REF) | 98,222 | |
| Exp. fragment size (ALT) | 99,221 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |