| SNP | Name | Pav_sc0001309.1_98133Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 13409885 | |
| PAV_r1.0 | Name | Pav_sc0001309.1 |
| Position | 98133 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001309.1_g250.1.mk |
| Annotation | PREDICTED: betaine aldehyde dehydrogenase 1, chloroplastic-like isoform X1 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.954G>A | |
| Amino Acid | p.Ala318Ala | |
| PCR | Forward primer | AACGTGCTCATTTACCTGCC |
| Reverse primer | CGCAACCTCCCGTCTTATAG | |
| Product size | 336 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |