| SNP | Name | Pav_sc0001309.1_721283R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 12786735 | |
| PAV_r1.0 | Name | Pav_sc0001309.1 |
| Position | 721283 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001309.1_g1420.1.mk |
| Annotation | hypothetical protein PRUPE_ppa005042mg | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.359T>C | |
| Amino Acid | p.Val120Ala | |
| PCR | Forward primer | CAGCATTGGCTTCTAAGTTGG |
| Reverse primer | TGCACATTTTCCTCATCTTCTG | |
| Product size | 350 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 184,166 | |
| Exp. fragment size (ALT) | 350 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |