| SNP | Name | Pav_sc0001289.1_65536W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 4428482 | |
| PAV_r1.0 | Name | Pav_sc0001289.1 |
| Position | 65536 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001289.1_g070.1.mk |
| Annotation | PREDICTED: alpha,alpha-trehalose-phosphate synthase | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1920+20A>T | |
| Amino Acid | ||
| PCR | Forward primer | AACAAAGGCATGAAAGCACC |
| Reverse primer | CCAAAGTTGACAAGGACCGT | |
| Product size | 329 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |