| SNP | Name | Pav_sc0001258.1_137024W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 34178219 | |
| PAV_r1.0 | Name | Pav_sc0001258.1 |
| Position | 137024 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001258.1_g270.1.mk |
| Annotation | PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X1 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.258T>A | |
| Amino Acid | p.Ile86Ile | |
| PCR | Forward primer | AAGTGCAAATGCCCCTTTAG |
| Reverse primer | TTTTCAAGATCCTCCGGTTG | |
| Product size | 342 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |