| SNP | Name | Pav_sc0001215.1_115540M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 13489939 | |
| PAV_r1.0 | Name | Pav_sc0001215.1 |
| Position | 115540 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001215.1_g220.1.mk |
| Annotation | hypothetical protein JCGZ_18643 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.147C>A | |
| Amino Acid | p.Asp49Glu | |
| PCR | Forward primer | GCTGTCACAAGACCAAGCAA |
| Reverse primer | GCTTTCAGATACCCAAAGCG | |
| Product size | 236 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | ALT/ALT |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |