| SNP | Name | Pav_sc0001215.1_115230W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 13490249 | |
| PAV_r1.0 | Name | Pav_sc0001215.1 |
| Position | 115230 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001215.1_g220.1.mk |
| Annotation | hypothetical protein JCGZ_18643 | |
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-121A>T | |
| Amino Acid | ||
| PCR | Forward primer | AGATGGTCCAAGGGGAGAGT |
| Reverse primer | TTGCTTGGTCTTGTGACAGC | |
| Product size | 301 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/REF |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |