| SNP | Name | Pav_sc0001196.1_261831Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 39622961 | |
| PAV_r1.0 | Name | Pav_sc0001196.1 |
| Position | 261831 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001196.1_g400.1.mk |
| Annotation | PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.438C>T | |
| Amino Acid | p.His146His | |
| PCR | Forward primer | CCATTGCCATCCAGAAGTTT |
| Reverse primer | AACATTTCAAAGGGAAGGCT | |
| Product size | 272 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |