| SNP | Name | Pav_sc0001124.1_217077Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 183736 | |
| PAV_r1.0 | Name | Pav_sc0001124.1 |
| Position | 217077 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001124.1_g320.1.mk |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: protein REVEILLE 1 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.234T>C | |
| Amino Acid | p.Leu78Leu | |
| PCR | Forward primer | TGACTCTGCTCCCAAGGTTT |
| Reverse primer | ATCTCCAGCCAGCTTTCACA | |
| Product size | 326 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | ALT/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |