| SNP | Name | Pav_sc0001124.1_175483M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 225330 | |
| PAV_r1.0 | Name | Pav_sc0001124.1 |
| Position | 175483 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001124.1_g270.1.mk |
| Annotation | NADP-dependent isocitrate dehydrogenase | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.220G>T | |
| Amino Acid | p.Val74Phe | |
| PCR | Forward primer | AATTGAATGCACTCGGGAAC |
| Reverse primer | GACCTTGGTCTTCCTCATCG | |
| Product size | 301 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |