| SNP | Name | Pav_sc0001082.1_6841R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 10219664 | |
| PAV_r1.0 | Name | Pav_sc0001082.1 |
| Position | 6841 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001082.1_g020.1.br |
| Annotation | sugar transport protein 13 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.372T>C | |
| Amino Acid | p.Ser124Ser | |
| PCR | Forward primer | AGCTGGCAAGCATAAGCAAT |
| Reverse primer | TCCTTGTACCTCGCTGCTTT | |
| Product size | 278 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 2,149,58,69 | |
| Exp. fragment size (ALT) | 2,149,15,43,69 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |