| SNP | Name | Pav_sc0001080.1_281503K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 22122379 | |
| PAV_r1.0 | Name | Pav_sc0001080.1 |
| Position | 281503 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001080.1_g360.1.mk |
| Annotation | PREDICTED: zerumbone synthase-like isoform X2 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.7+579C>A | |
| Amino Acid | ||
| PCR | Forward primer | TACCATGGCCTTGACAAACA |
| Reverse primer | TCCCGCAATTTATCTCACAA | |
| Product size | 269 | |
| Enzymes for CAPS | XbaI | |
| Exp. fragment size (REF) | 269 | |
| Exp. fragment size (ALT) | 142,127 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |